If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ), 'gf_id' => 'HOM05D000538', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000538' ), 'data_identifier' => 'HOM05D000538', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000538', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1016', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p16480' => 'bna', 'A01p30590' => 'bna', 'A03p34100' => 'bna', 'A03p55820' => 'bna', 'A03p66900' => 'bna', 'A03p67190' => 'bna', 'A03p67690' => 'bna', 'A03p67700' => 'bna', 'A04p08610' => 'bna', 'A04p15220' => 'bna', 'A05p42680' => 'bna', 'A06p08130' => 'bna', 'A06p37810' => 'bna', 'A09p05100' => 'bna', 'A09p16670' => 'bna', 'Aa31csc81G20' => 'aar', 'Aa31LG11G8780' => 'aar', 'Aa31LG11G8790' => 'aar', 'Aa31LG1G3240' => 'aar', 'Aa31LG2G9100' => 'aar', 'Aa31LG5G15310' => 'aar', 'Aa31LG5G24170' => 'aar', 'Aa31sc411G10' => 'aar', 'Aa31sc52G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2588' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.2238' => 'aag', 'Actinidia05541' => 'ach', 'Actinidia12491' => 'ach', 'Actinidia24277' => 'ach', 'Actinidia25177' => 'ach', 'Actinidia26762' => 'ach', 'Actinidia26763' => 'ach', 'Actinidia26954' => 'ach', 'Actinidia28811' => 'ach', 'Actinidia30724' => 'ach', 'Actinidia30725' => 'ach', 'Actinidia30920' => 'ach', 'Actinidia33844' => 'ach', 'Actinidia33845' => 'ach', 'Actinidia36919' => 'ach', 'Ah.04g162420' => 'amhyb', 'Ah.06g192650' => 'amhyb', 'Ah.11g039160' => 'amhyb', 'Ah.14g088490' => 'amhyb', 'AL1G22620' => 'aly', 'AL1G62660' => 'aly', 'AL1G63100' => 'aly', 'AL1G63790' => 'aly', 'AL1G64200' => 'aly', 'AL1G64450' => 'aly', 'AL2G14390' => 'aly', 'AL2G24230' => 'aly', 'AL3G15240' => 'aly', 'AL3G15740' => 'aly', 'AL3G48460' => 'aly', 'AL3G53450' => 'aly', 'AL3G53940' => 'aly', 'AL5G21460' => 'aly', 'AL6G40350' => 'aly', 'AL6G40360' => 'aly', 'AL7G27940' => 'aly', 'AL7G43190' => 'aly', 'AL7G49490' => 'aly', 'Aqoxy1G00856' => 'aox', 'Aqoxy1G00857' => 'aox', 'Aqoxy2G02473' => 'aox', 'Aqoxy2G02479' => 'aox', 'Aqoxy3G02153' => 'aox', 'Aqoxy3G04094' => 'aox', 'Aqoxy4G01596' => 'aox', 'Aqoxy4G01772' => 'aox', 'Aqoxy5G01294' => 'aox', 'Aqoxy5G02839' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AC8M2L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AXW1TQ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CHJC5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DZ7Z6Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JZ11TB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L9U4X5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M5NDAX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PD68BJ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PH8Y5X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.R0JQVD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UJ8M5F' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XM9FK9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.YMQ72N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z7YL41' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZZ4VEM' => 'arhy', 'AT1G11510' => 'ath', 'AT1G44810' => 'ath', 'AT1G53935' => 'ath', 'AT1G55950' => 'ath', 'AT1G61730' => 'ath', 'AT1G66420' => 'ath', 'AT2G01370' => 'ath', 'AT2G20613' => 'ath', 'AT2G20805' => 'ath', 'AT3G04930' => 'ath', 'AT3G05300' => 'ath', 'AT4G00130' => 'ath', 'AT4G00238' => 'ath', 'AT4G00250' => 'ath', 'AT4G00390' => 'ath', 'AT4G00610' => 'ath', 'AT4G01260' => 'ath', 'AT4G08263' => 'ath', 'AT4G25210' => 'ath', 'AT5G23180' => 'ath', 'AT5G28040' => 'ath', 'AT5G28050' => 'ath', 'ATR0109G030' => 'atr', 'ATR0753G052' => 'atr', 'ATR0757G030' => 'atr', 'ATR0796G117' => 'atr', 'ATR0796G211' => 'atr', 'ATR1158G014' => 'atr', 'Atru.chr1.3739' => 'acertr', 'Atru.chr1.3753' => 'acertr', 'Atru.chr2.717' => 'acertr', 'Atru.chr2.720' => 'acertr', 'Atru.chr2.721' => 'acertr', 'Atru.chr2.722' => 'acertr', 'Atru.chr4.3182' => 'acertr', 'AUR62000969' => 'cqu', 'AUR62000970' => 'cqu', 'AUR62000971' => 'cqu', 'AUR62000972' => 'cqu', 'AUR62004994' => 'cqu', 'AUR62004995' => 'cqu', 'AUR62004996' => 'cqu', 'AUR62012581' => 'cqu', 'AUR62014620' => 'cqu', 'AUR62044486' => 'cqu', 'BcaB01g03409' => 'bca', 'BcaB02g07469' => 'bca', 'BcaB03g16075' => 'bca', 'BcaB03g16880' => 'bca', 'BcaB04g17138' => 'bca', 'BcaB04g17673' => 'bca', 'BcaB04g17674' => 'bca', 'BcaB04g17675' => 'bca', 'BcaB04g19271' => 'bca', 'BcaB04g19645' => 'bca', 'BcaB04g19646' => 'bca', 'BcaB04g21380' => 'bca', 'BcaB06g27693' => 'bca', 'BcaB07g31281' => 'bca', 'BcaC02g08887' => 'bca', 'BcaC02g09411' => 'bca', 'BcaC02g10543' => 'bca', 'BcaC04g22347' => 'bca', 'BcaC04g23709' => 'bca', 'BcaC06g31859' => 'bca', 'BcaC06g31945' => 'bca', 'BcaC06g32829' => 'bca', 'BcaC06g32831' => 'bca', 'BcaC07g37349' => 'bca', 'BcaC09g47815' => 'bca', 'BcaC09g50797' => 'bca', 'BcaC09g52239' => 'bca', 'BcaNung04251' => 'bca', 'BcaNung04252' => 'bca', 'BcaNung04253' => 'bca', 'BcaNung04255' => 'bca', 'BcaNung06352' => 'bca', 'BcaNung07112' => 'bca', 'BNapus_Darmor_BZH_scaffold_78p01050' => 'bna', 'BolC1t01995H' => 'bol', 'BolC1t03848H' => 'bol', 'BolC1t05721H' => 'bol', 'BolC3t16430H' => 'bol', 'BolC4t24311H' => 'bol', 'BolC4t25817H' => 'bol', 'BolC4t26529H' => 'bol', 'BolC5t29712H' => 'bol', 'BolC7t44577H' => 'bol', 'BolC7t45896H' => 'bol', 'BolC8t47645H' => 'bol', 'BolC9t53480H' => 'bol', 'BolC9t54934H' => 'bol', 'BraA01t01602Z' => 'bra', 'BraA01t02694Z' => 'bra', 'BraA01t02696Z' => 'bra', 'BraA01t02697Z' => 'bra', 'BraA01t02698Z' => 'bra', 'BraA01t02756Z' => 'bra', 'BraA01t02790Z' => 'bra', 'BraA01t03191Z' => 'bra', 'BraA01t04500Z' => 'bra', 'BraA03t12584Z' => 'bra', 'BraA03t14650Z' => 'bra', 'BraA04t16555Z' => 'bra', 'BraA04t17162Z' => 'bra', 'BraA05t22985Z' => 'bra', 'BraA06t24012Z' => 'bra', 'BraA06t26700Z' => 'bra', 'BraA09t36149Z' => 'bra', 'BraA09t37306Z' => 'bra', 'C01p20690' => 'bna', 'C01p38980' => 'bna', 'C03p41490' => 'bna', 'C04p27660' => 'bna', 'C04p42350' => 'bna', 'C04p49440' => 'bna', 'C05p09710' => 'bna', 'C05p62400' => 'bna', 'C07p40420' => 'bna', 'C07p54100' => 'bna', 'C08p07930' => 'bna', 'C09p05510' => 'bna', 'C09p20300' => 'bna', 'CAN.G134.172' => 'can', 'CAN.G134.173' => 'can', 'CAN.G150.1' => 'can', 'CAN.G157.14' => 'can', 'CAN.G2006.4' => 'can', 'CAN.G2015.5' => 'can', 'CAN.G492.84' => 'can', 'CAN.G492.89' => 'can', 'CAN.G581.2' => 'can', 'CAN.G6565.1' => 'can', 'CAN.G857.6' => 'can', 'CAN.G857.7' => 'can', 'CAN.G86.22' => 'can', 'CAN.G95.9' => 'can', 'CANSAT54G1163' => 'cansat', 'CANSAT64G0308' => 'cansat', 'CANSAT64G0769' => 'cansat', 'CANSAT78G0225' => 'cansat', 'CARHR011790' => 'chi', 'CARHR045900' => 'chi', 'CARHR050610' => 'chi', 'CARHR079210' => 'chi', 'CARHR079640' => 'chi', 'CARHR112660' => 'chi', 'CARHR128180' => 'chi', 'CARHR184980' => 'chi', 'CARHR184990' => 'chi', 'CARHR216020' => 'chi', 'CARHR219220' => 'chi', 'CARHR232610' => 'chi', 'CARHR261640' => 'chi', 'Carub.0001s1112' => 'cru', 'Carub.0001s1113' => 'cru', 'Carub.0002s0334' => 'cru', 'Carub.0003s0414' => 'cru', 'Carub.0003s0456' => 'cru', 'Carub.0003s3455' => 'cru', 'Carub.0003s3527' => 'cru', 'Carub.0003s3541' => 'cru', 'Carub.0003s3551' => 'cru', 'Carub.0004s0072' => 'cru', 'Carub.0006s2556' => 'cru', 'Carub.0006s2557' => 'cru', 'Carub.0007s1582' => 'cru', 'Carub.0007s2897' => 'cru', 'Carub.0007s3523' => 'cru', 'Carub.0026s0001' => 'cru', 'Ca_00207_v3' => 'car', 'Ca_02329_v3' => 'car', 'Ca_05065_v3' => 'car', 'Ca_09404_v3' => 'car', 'Ca_10059_v3' => 'car', 'Ca_10060_v3' => 'car', 'Ca_10061_v3' => 'car', 'Ca_17144_v3' => 'car', 'Ca_21363_v3' => 'car', 'Ca_30163_v3' => 'car', 'CBR_g54960' => 'cbr', 'Cc02_g31480' => 'ccan', 'Cc02_g31490' => 'ccan', 'Cc02_g31500' => 'ccan', 'Cc07_g13550' => 'ccan', 'CDE02G0212' => 'cde', 'CDE02G3105' => 'cde', 'CDE02G3414' => 'cde', 'CDE02G4249' => 'cde', 'CDE05G0588' => 'cde', 'CDE05G1406' => 'cde', 'CDE05G1513' => 'cde', 'CDE05G3205' => 'cde', 'CDE08G0243' => 'cde', 'CDE09G0318' => 'cde', 'CDE09G1126' => 'cde', 'CDE11G0013' => 'cde', 'CDE11G1260' => 'cde', 'CDE12G0229' => 'cde', 'Cfa006470' => 'cfa', 'Cfa006471' => 'cfa', 'Cfa014454' => 'cfa', 'Cfa015745' => 'cfa', 'Cfa016408' => 'cfa', 'Ciclev10001378m.g' => 'ccl', 'Ciclev10002601m.g' => 'ccl', 'Ciclev10005995m.g' => 'ccl', 'Ciclev10011975m.g' => 'ccl', 'Ciclev10012534m.g' => 'ccl', 'Ciclev10015528m.g' => 'ccl', 'Ciclev10030003m.g' => 'ccl', 'CiPaw.01G127600' => 'cil', 'CiPaw.03G071200' => 'cil', 'CiPaw.04G118800' => 'cil', 'CiPaw.07G007100' => 'cil', 'CiPaw.07G007200' => 'cil', 'CiPaw.08G178800' => 'cil', 'CiPaw.08G178900' => 'cil', 'CiPaw.09G080200' => 'cil', 'ClCG01G022290' => 'cla', 'ClCG02G001630' => 'cla', 'ClCG02G016380' => 'cla', 'ClCG03G016230' => 'cla', 'ClCG03G016240' => 'cla', 'COL.COLO4_09036' => 'col', 'COL.COLO4_13007' => 'col', 'COL.COLO4_15268' => 'col', 'COL.COLO4_15271' => 'col', 'COL.COLO4_16241' => 'col', 'COL.COLO4_17402' => 'col', 'Cpa.g.sc116.48' => 'cpa', 'Cpa.g.sc1622.1' => 'cpa', 'Cpa.g.sc264.14' => 'cpa', 'Cpa.g.sc264.16' => 'cpa', 'Cpa.g.sc8.251' => 'cpa', 'CsaV3_1G039710' => 'csa', 'CsaV3_1G039720' => 'csa', 'CsaV3_2G004350' => 'csa', 'CsaV3_6G049420' => 'csa', 'CsaV3_7G003860' => 'csa', 'CSS0006651' => 'camsi', 'CSS0008596' => 'camsi', 'CSS0010019' => 'camsi', 'CSS0012610' => 'camsi', 'CSS0022087' => 'camsi', 'CSS0038187' => 'camsi', 'CSS0042986' => 'camsi', 'CSS0046322' => 'camsi', 'CSS0047893' => 'camsi', 'DCAR_007740' => 'dca', 'DCAR_007866' => 'dca', 'DCAR_009695' => 'dca', 'DCAR_015700' => 'dca', 'DCAR_015710' => 'dca', 'DCAR_015731' => 'dca', 'DCAR_015773' => 'dca', 'DCAR_015900' => 'dca', 'DCAR_015989' => 'dca', 'DCAR_017288' => 'dca', 'DCAR_024903' => 'dca', 'DCAR_029726' => 'dca', 'DCAR_029727' => 'dca', 'DCAR_031282' => 'dca', 'DCAR_031683' => 'dca', 'DCAR_032280' => 'dca', 'Dinv10905' => 'din', 'Dinv11567' => 'din', 'Dinv11569' => 'din', 'Dinv15618' => 'din', 'Dinv17755' => 'din', 'Dinv17756' => 'din', 'Dinv18544' => 'din', 'Dinv18944' => 'din', 'Dinv19031' => 'din', 'Dinv20713' => 'din', 'Duzib052G0757' => 'dzi', 'Duzib128G1082' => 'dzi', 'Duzib128G1423' => 'dzi', 'Duzib138G1169' => 'dzi', 'Duzib177G0154' => 'dzi', 'Duzib177G0549' => 'dzi', 'Duzib177G0906' => 'dzi', 'Duzib211G0314' => 'dzi', 'Duzib213G0266' => 'dzi', 'Duzib213G0460' => 'dzi', 'Duzib248G0414' => 'dzi', 'Duzib268G1429' => 'dzi', 'ECA232G0042' => 'eca', 'ECA232G2899' => 'eca', 'ECA236G5057' => 'eca', 'ECA238G0259' => 'eca', 'ECA238G0998' => 'eca', 'ECA238G2023' => 'eca', 'ECA246G3123' => 'eca', 'ECA248G1478' => 'eca', 'ECA248G3523' => 'eca', 'EL10Ac4g09188' => 'bvu', 'EL10Ac4g09189' => 'bvu', 'EL10Ac4g09191' => 'bvu', 'EL10As6g23704' => 'bvu', 'Eucgr.E03593' => 'egr', 'Eucgr.H04136' => 'egr', 'Eucgr.H04388' => 'egr', 'FAN01G0699' => 'fan', 'FAN02G0719' => 'fan', 'FAN02G2884' => 'fan', 'FAN02G3464' => 'fan', 'FAN05G0240' => 'fan', 'FAN05G1560' => 'fan', 'FAN05G1770' => 'fan', 'FAN05G2447' => 'fan', 'FAN05G3492' => 'fan', 'FAN05G3574' => 'fan', 'FAN05G5032' => 'fan', 'FAN05G5135' => 'fan', 'FAN05G5399' => 'fan', 'FAN07G2705' => 'fan', 'FAN09G0262' => 'fan', 'FAN09G1169' => 'fan', 'FAN09G3100' => 'fan', 'FAN09G3475' => 'fan', 'FAN09G4736' => 'fan', 'FAN14G0602' => 'fan', 'FAN14G2578' => 'fan', 'FAN14G2629' => 'fan', 'FAN14G4024' => 'fan', 'FAN21G0633' => 'fan', 'FAN21G1131' => 'fan', 'FAN25G1625' => 'fan', 'FAN27G0722' => 'fan', 'FvH4_3g02930' => 'fve', 'FvH4_6g03650' => 'fve', 'FvH4_6g03660' => 'fve', 'FvH4_6g03670' => 'fve', 'FvH4_6g43700' => 'fve', 'Glyma.03G245200' => 'gma', 'Glyma.04G143400' => 'gma', 'Glyma.04G156500' => 'gma', 'Glyma.05G088300' => 'gma', 'Glyma.09G080100' => 'gma', 'Glyma.10G160000' => 'gma', 'Glyma.10G160100' => 'gma', 'Glyma.10G160200' => 'gma', 'Glyma.13G117500' => 'gma', 'Glyma.13G251000' => 'gma', 'Glyma.15G063300' => 'gma', 'Glyma.15G186100' => 'gma', 'Glyma.16G119900' => 'gma', 'Glyma.17G042400' => 'gma', 'Glyma.19G242600' => 'gma', 'Glyma.20G228200' => 'gma', 'Glyma.20G228300' => 'gma', 'Glyma.20G228500' => 'gma', 'Gohir.A01G040800' => 'ghi', 'Gohir.A05G223250' => 'ghi', 'Gohir.A10G196200' => 'ghi', 'Gohir.A11G255800' => 'ghi', 'Gohir.A11G255900' => 'ghi', 'Gohir.A11G256000' => 'ghi', 'Gohir.A12G056500' => 'ghi', 'Gohir.A13G018100' => 'ghi', 'Gohir.A13G105400' => 'ghi', 'Gohir.D01G028300' => 'ghi', 'Gohir.D05G225950' => 'ghi', 'Gohir.D10G203100' => 'ghi', 'Gohir.D11G265600' => 'ghi', 'Gohir.D11G265700' => 'ghi', 'Gohir.D13G019101' => 'ghi', 'Gohir.D13G108400' => 'ghi', 'Gorai.002G037800' => 'gra', 'Gorai.007G285600' => 'gra', 'Gorai.007G285700' => 'gra', 'Gorai.008G058900' => 'gra', 'Gorai.009G233500' => 'gra', 'Gorai.011G228000' => 'gra', 'Gorai.013G021200' => 'gra', 'Gorai.013G121800' => 'gra', 'GSVIVG01002745001' => 'vvi', 'GSVIVG01021862001' => 'vvi', 'HanXRQChr01g0014741' => 'han', 'HanXRQChr01g0019011' => 'han', 'HanXRQChr03g0087661' => 'han', 'HanXRQChr05g0130791' => 'han', 'HanXRQChr12g0379931' => 'han', 'HanXRQChr14g0444481' => 'han', 'HanXRQChr14g0445951' => 'han', 'HanXRQChr14g0446621' => 'han', 'HanXRQChr15g0463091' => 'han', 'HanXRQChr15g0482761' => 'han', 'HanXRQChr17g0543191' => 'han', 'Haze_00751' => 'cav', 'Haze_04320' => 'cav', 'Haze_04321' => 'cav', 'Haze_04348' => 'cav', 'Haze_06686' => 'cav', 'Haze_14251' => 'cav', 'Haze_14252' => 'cav', 'Hma1.2p1_0083F.1_g042780' => 'hma', 'Hma1.2p1_0158F.1_g070260' => 'hma', 'Hma1.2p1_0332F.1_g127720' => 'hma', 'Hma1.2p1_0332F.1_g127730' => 'hma', 'Hma1.2p1_0439F.1_g153220' => 'hma', 'Hma1.2p1_0613F.1_g189370' => 'hma', 'HPP92_001950' => 'vpl', 'HPP92_002449' => 'vpl', 'HPP92_004943' => 'vpl', 'HPP92_013621' => 'vpl', 'HPP92_015911' => 'vpl', 'HPP92_015944' => 'vpl', 'HPP92_017308' => 'vpl', 'HPP92_020549' => 'vpl', 'Hund22108' => 'sun', 'Hund30679' => 'sun', 'Hund30680' => 'sun', 'Lalb_Chr04g0261071' => 'lal', 'Lalb_Chr05g0228411' => 'lal', 'Lalb_Chr12g0200521' => 'lal', 'Lalb_Chr13g0299041' => 'lal', 'Lalb_Chr15g0076911' => 'lal', 'Lalb_Chr15g0077331' => 'lal', 'Lalb_Chr16g0392201' => 'lal', 'Lalb_Chr18g0045111' => 'lal', 'Lalb_Chr18g0048321' => 'lal', 'Lalb_Chr20g0122641' => 'lal', 'Lalb_Chr21g0310881' => 'lal', 'Lalb_Chr23g0276111' => 'lal', 'Lj1g0015191' => 'lja', 'Lj2C275T5' => 'lonja', 'Lj2g0017985' => 'lja', 'Lj2g0028107' => 'lja', 'Lj4g0020504' => 'lja', 'Lj5g0020032' => 'lja', 'Lj5g0026680' => 'lja', 'Lj5g0027909' => 'lja', 'Lj6C704T0' => 'lonja', 'Lj6g0011510' => 'lja', 'Lj6g0020978' => 'lja', 'Lj6g0024738' => 'lja', 'Lj7A475G49' => 'lonja', 'Lj7P475T49' => 'lonja', 'Lj8P121T27' => 'lonja', 'Lj8P55T60' => 'lonja', 'Lju114C4T13' => 'lonja', 'Lju1220C3T4' => 'lonja', 'Lsat_1_v5_gn_1_125380' => 'lsa', 'Lsat_1_v5_gn_1_78741' => 'lsa', 'Lsat_1_v5_gn_1_81901' => 'lsa', 'Lsat_1_v5_gn_2_64840' => 'lsa', 'Lsat_1_v5_gn_2_66580' => 'lsa', 'Lsat_1_v5_gn_3_43101' => 'lsa', 'Lsat_1_v5_gn_4_139341' => 'lsa', 'Lsat_1_v5_gn_4_139620' => 'lsa', 'Lsat_1_v5_gn_5_179580' => 'lsa', 'Lsat_1_v5_gn_7_18320' => 'lsa', 'Manes.01G117600' => 'mes', 'Manes.07G017600' => 'mes', 'Manes.08G127700' => 'mes', 'Manes.09G156700' => 'mes', 'Manes.09G156900' => 'mes', 'Manes.12G076500' => 'mes', 'Manes.16G016900' => 'mes', 'Manes.17G030100' => 'mes', 'Manes.17G030155' => 'mes', 'Mapoly0083s0045' => 'mpo', 'MBI02_g02477_MAGBIO' => 'mbi', 'MBI07_g31092_MAGBIO' => 'mbi', 'MBI18_g24145_MAGBIO' => 'mbi', 'MBI19_g04410_MAGBIO' => 'mbi', 'MBI19_g04835_MAGBIO' => 'mbi', 'MBI19_g23446_MAGBIO' => 'mbi', 'MBI19_g37074_MAGBIO' => 'mbi', 'MBI19_g37076_MAGBIO' => 'mbi', 'MD04G1219400' => 'mdo', 'MD04G1219700' => 'mdo', 'MD04G1219800' => 'mdo', 'MD05G1034900' => 'mdo', 'MD05G1335900' => 'mdo', 'MD09G1103400' => 'mdo', 'MD09G1264200' => 'mdo', 'MD12G1236400' => 'mdo', 'MD12G1236500' => 'mdo', 'MD12G1236600' => 'mdo', 'MD13G1138000' => 'mdo', 'Medtr1g081420' => 'mtr', 'Medtr1g081440' => 'mtr', 'Medtr1g081450' => 'mtr', 'Medtr1g081550' => 'mtr', 'Medtr1g081560' => 'mtr', 'Medtr1g081570' => 'mtr', 'Medtr1g081580' => 'mtr', 'Medtr2g010790' => 'mtr', 'Medtr2g045280' => 'mtr', 'Medtr3g005755' => 'mtr', 'Medtr3g070120' => 'mtr', 'Medtr4g124190' => 'mtr', 'Medtr7g114600' => 'mtr', 'MELO3C004359.2' => 'cme', 'MELO3C007351.2' => 'cme', 'MELO3C014886.2' => 'cme', 'MELO3C015400.2' => 'cme', 'MELO3C015402.2' => 'cme', 'MELO3C018793.2' => 'cme', 'MELO3C027126.2' => 'cme', 'MELO3C032586.2' => 'cme', 'Migut.B01065' => 'egut', 'Migut.B01066' => 'egut', 'Migut.H01208' => 'egut', 'Migut.H01546' => 'egut', 'Migut.K00897' => 'egut', 'Migut.M01263' => 'egut', 'Migut.N01941' => 'egut', 'Migut.N01942' => 'egut', 'MSTRG.13164' => 'ama', 'MSTRG.14159' => 'ama', 'MSTRG.14651' => 'ama', 'MSTRG.20435' => 'ama', 'MSTRG.20436' => 'ama', 'MSTRG.3717' => 'ama', 'MSTRG.9009' => 'ama', 'MSTRG.9015' => 'ama', 'Nitab4.5_0000069g0580' => 'nta', 'Nitab4.5_0000404g0020' => 'nta', 'Nitab4.5_0000660g0020' => 'nta', 'Nitab4.5_0000660g0070' => 'nta', 'Nitab4.5_0000780g0050' => 'nta', 'Nitab4.5_0000786g0080' => 'nta', 'Nitab4.5_0000843g0050' => 'nta', 'Nitab4.5_0001134g0160' => 'nta', 'Nitab4.5_0001519g0200' => 'nta', 'Nitab4.5_0002079g0040' => 'nta', 'Nitab4.5_0002361g0110' => 'nta', 'Nitab4.5_0002840g0060' => 'nta', 'Nitab4.5_0002840g0090' => 'nta', 'Nitab4.5_0003429g0050' => 'nta', 'Nitab4.5_0004119g0040' => 'nta', 'Nitab4.5_0004679g0010' => 'nta', 'Nitab4.5_0005690g0030' => 'nta', 'Nitab4.5_0005690g0050' => 'nta', 'Nitab4.5_0007769g0040' => 'nta', 'Nitab4.5_0008264g0010' => 'nta', 'Nitab4.5_0018168g0010' => 'nta', 'Nn1g03725' => 'nnu', 'Nn1g03728' => 'nnu', 'Nn1g04731' => 'nnu', 'Nn1g04778' => 'nnu', 'Nn1g04779' => 'nnu', 'Nn4g25276' => 'nnu', 'Nn4g25336' => 'nnu', 'Nn4g26474' => 'nnu', 'Oeu012477.1' => 'oeu', 'Oeu021604.1' => 'oeu', 'Oeu021636.1' => 'oeu', 'Oeu027048.1' => 'oeu', 'Oeu027049.1' => 'oeu', 'Oeu045909.1' => 'oeu', 'Oeu051232.1' => 'oeu', 'Oeu058169.1' => 'oeu', 'Oeu058171.1' => 'oeu', 'Oeu063070.2' => 'oeu', 'Os01g0249900' => 'osa', 'Os03g0370250' => 'osa', 'Os03g0708800' => 'osa', 'Os03g0833900' => 'osa', 'Os07g0245100' => 'osa', 'Os07g0636100' => 'osa', 'Os08g0467600' => 'osa', 'Os09g0451700' => 'osa', 'Peaxi162Scf00007g00141' => 'pax', 'Peaxi162Scf00030g00224' => 'pax', 'Peaxi162Scf00331g01020' => 'pax', 'Peaxi162Scf00404g00019' => 'pax', 'Peaxi162Scf00404g00030' => 'pax', 'Peaxi162Scf00710g00410' => 'pax', 'Peaxi162Scf00939g00022' => 'pax', 'PGR004G0224' => 'pgr', 'PGR004G2796' => 'pgr', 'PGR031G1168' => 'pgr', 'PGR031G3664' => 'pgr', 'PGR031G3812' => 'pgr', 'PGR031G3960' => 'pgr', 'PGR042G2787' => 'pgr', 'PGR083G1356' => 'pgr', 'PGR083G1539' => 'pgr', 'PGSC0003DMG400003572' => 'stu', 'PGSC0003DMG400022471' => 'stu', 'PGSC0003DMG400022506' => 'stu', 'PGSC0003DMG400026193' => 'stu', 'PGSC0003DMG400026195' => 'stu', 'PGSC0003DMG400026196' => 'stu', 'PGSC0003DMG400026206' => 'stu', 'PGSC0003DMG400030831' => 'stu', 'PGSC0003DMG400035134' => 'stu', 'PGSC0003DMG400046446' => 'stu', 'Phvul.003G124100' => 'pvu', 'Phvul.004G052300' => 'pvu', 'Phvul.006G099400' => 'pvu', 'Phvul.006G196300' => 'pvu', 'Phvul.007G185400' => 'pvu', 'Phvul.007G185500' => 'pvu', 'Phvul.007G185600' => 'pvu', 'Phvul.007G185701' => 'pvu', 'Phvul.009G220800' => 'pvu', 'Potri.001G261700' => 'ptr', 'Potri.001G293900' => 'ptr', 'Potri.004G090900' => 'ptr', 'Potri.005G049300' => 'ptr', 'Potri.005G075000' => 'ptr', 'Potri.007G119800' => 'ptr', 'Potri.009G056400' => 'ptr', 'Potri.009G088400' => 'ptr', 'Potri.010G003500' => 'ptr', 'Potri.013G036000' => 'ptr', 'Pp3c1_28350' => 'ppa', 'Pp3c23_8480' => 'ppa', 'Pp3s32_20' => 'ppa', 'Prupe.1G103100' => 'ppe', 'Prupe.3G161700' => 'ppe', 'Prupe.3G222100' => 'ppe', 'Prupe.4G029400' => 'ppe', 'Prupe.4G287400' => 'ppe', 'Prupe.6G338700' => 'ppe', 'Prupe.6G338800' => 'ppe', 'Prupe.6G339100' => 'ppe', 'Prupe.7G003400' => 'ppe', 'Psat1g014720' => 'psa', 'Psat1g017200' => 'psa', 'Psat1g211120' => 'psa', 'Psat3g008360' => 'psa', 'Psat4g021000' => 'psa', 'Psat5g127240' => 'psa', 'Psat6g147240' => 'psa', 'Psat6g147280' => 'psa', 'Psat6g147320' => 'psa', 'Psat6g182800' => 'psa', 'PSO017G6042' => 'pso', 'PSO063G5090' => 'pso', 'PSO170G0914' => 'pso', 'PSO170G3389' => 'pso', 'PSO170G5025' => 'pso', 'PSO210G0344' => 'pso', 'PSO210G2224' => 'pso', 'PSO339G1009' => 'pso', 'PSO339G1851' => 'pso', 'PSO339G6485' => 'pso', 'PSO349G0134' => 'pso', 'PSO349G0318' => 'pso', 'PSO357G0178' => 'pso', 'PSO357G0535' => 'pso', 'PSO384G1225' => 'pso', 'PSO384G1828' => 'pso', 'PSO384G2704' => 'pso', 'PSO761G0254' => 'pso', 'PSO765G0032' => 'pso', 'PSO765G0193' => 'pso', 'PSO765G0228' => 'pso', 'PSO782G5260' => 'pso', 'PSO832G4165' => 'pso', 'QL01p044471' => 'qlo', 'QL02p026523' => 'qlo', 'QL02p057937' => 'qlo', 'QL03p023291' => 'qlo', 'QL03p023999' => 'qlo', 'QL03p024011' => 'qlo', 'QL03p024064' => 'qlo', 'QL04p080862' => 'qlo', 'QL05p077181' => 'qlo', 'QL06p014557' => 'qlo', 'QL06p014594' => 'qlo', 'QL08p034081' => 'qlo', 'QL09p048604' => 'qlo', 'QL93p0073_1288' => 'qlo', 'QL93p0100_0353' => 'qlo', 'QL93p0107_0037' => 'qlo', 'QL93p0107_0595' => 'qlo', 'RcHm_v2.0_Chr2g0160351' => 'rch', 'RcHm_v2.0_Chr3g0452181' => 'rch', 'RcHm_v2.0_Chr3g0452191' => 'rch', 'RcHm_v2.0_Chr3g0452201' => 'rch', 'RcHm_v2.0_Chr3g0496791' => 'rch', 'RcHm_v2.0_Chr5g0004541' => 'rch', 'Rhsim02G0115300' => 'rsi', 'Rhsim05G0159700' => 'rsi', 'Rhsim05G0159800' => 'rsi', 'Rhsim06G0156300' => 'rsi', 'Rhsim10G0176800' => 'rsi', 'Rhsim11G0019400' => 'rsi', 'Rhsim11G0026100' => 'rsi', 'Rhsim11G0026400' => 'rsi', 'Rhsim11G0026600' => 'rsi', 'Rhsim11G0032500' => 'rsi', 'Rhsim11G0046900' => 'rsi', 'Rhsim11G0047000' => 'rsi', 'Rhsim13G0162300' => 'rsi', 'RhsimUnG0059200' => 'rsi', 'Sabra04G0061100' => 'sbr', 'Sabra05G0044600' => 'sbr', 'Sabra05G0061700' => 'sbr', 'Sabra07G0097200' => 'sbr', 'Sabra09G0041300' => 'sbr', 'Sabra09G0068400' => 'sbr', 'Sabra10G0002900' => 'sbr', 'Sabra11G0087400' => 'sbr', 'Sabra11G0087800' => 'sbr', 'Sabra13G0035300' => 'sbr', 'Sabra16G0160500' => 'sbr', 'Sabra16G0183500' => 'sbr', 'SalBow1G6852' => 'sbo', 'SalBow3G2906' => 'sbo', 'SalBow5G1539' => 'sbo', 'SalBow6G4402' => 'sbo', 'SalBow6G5108' => 'sbo', 'SalBow6G6758' => 'sbo', 'SalBow7G2435' => 'sbo', 'SalBow8G4404' => 'sbo', 'Sc01g0008550' => 'sci', 'Sc06g0003630' => 'sci', 'Sc20g0000210' => 'sci', 'Sc20g0000220' => 'sci', 'Sc21g0001810' => 'sci', 'Sc24g0000080' => 'sci', 'Sed0002193' => 'sed', 'Sed0007057' => 'sed', 'Sed0010642' => 'sed', 'Sed0011252' => 'sed', 'Sed0014375' => 'sed', 'Sed0016102' => 'sed', 'Sed0017104' => 'sed', 'Sed0021491' => 'sed', 'Sed0024518' => 'sed', 'SEGI_00531' => 'sgi', 'SEGI_29519' => 'sgi', 'SEGI_31718' => 'sgi', 'SGA_v2.0_scaffold12G06174' => 'sas', 'SGA_v2.0_scaffold135G34793' => 'sas', 'SGA_v2.0_scaffold157G37398' => 'sas', 'SGA_v2.0_scaffold159G37712' => 'sas', 'SGA_v2.0_scaffold15G07310' => 'sas', 'SGA_v2.0_scaffold172G38966' => 'sas', 'SGA_v2.0_scaffold20G09190' => 'sas', 'SGA_v2.0_scaffold24G10697' => 'sas', 'SGA_v2.0_scaffold25G10730' => 'sas', 'SGA_v2.0_scaffold27G11469' => 'sas', 'SGA_v2.0_scaffold36G14403' => 'sas', 'SGA_v2.0_scaffold36G14570' => 'sas', 'SGA_v2.0_scaffold3G01672' => 'sas', 'SGA_v2.0_scaffold45G17187' => 'sas', 'SGA_v2.0_scaffold469G52068' => 'sas', 'SGA_v2.0_scaffold49G18271' => 'sas', 'SGA_v2.0_scaffold52G19023' => 'sas', 'SGA_v2.0_scaffold52G19049' => 'sas', 'SGA_v2.0_scaffold52G19076' => 'sas', 'SGA_v2.0_scaffold52G19080' => 'sas', 'SGA_v2.0_scaffold52G19083' => 'sas', 'SGA_v2.0_scaffold52G19085' => 'sas', 'SGA_v2.0_scaffold52G19087' => 'sas', 'SGA_v2.0_scaffold52G19092' => 'sas', 'SGA_v2.0_scaffold52G19096' => 'sas', 'SGA_v2.0_scaffold52G19112' => 'sas', 'SGA_v2.0_scaffold52G19146' => 'sas', 'SGA_v2.0_scaffold52G19155' => 'sas', 'SGA_v2.0_scaffold52G19184' => 'sas', 'SGA_v2.0_scaffold62G21345' => 'sas', 'SGA_v2.0_scaffold62G21349' => 'sas', 'SGA_v2.0_scaffold62G21365' => 'sas', 'SGA_v2.0_scaffold67G22572' => 'sas', 'SGA_v2.0_scaffold90G27740' => 'sas', 'SHI18323' => 'shi', 'SHI18329' => 'shi', 'SMO228G0052' => 'smo', 'Solyc01g097880.4' => 'sly', 'Solyc01g097890.2' => 'sly', 'Solyc02g083750.1' => 'sly', 'Solyc04g074560.1' => 'sly', 'Solyc05g051330.1' => 'sly', 'Solyc07g052740.3' => 'sly', 'Solyc07g052750.1' => 'sly', 'Solyc07g052760.3' => 'sly', 'Solyc07g052820.1' => 'sly', 'Solyc07g052830.4' => 'sly', 'Solyc07g052860.3' => 'sly', 'Solyc07g052870.2' => 'sly', 'Solyc07g052900.1' => 'sly', 'Sopen01g041480' => 'spe', 'Sopen01g041490' => 'spe', 'Sopen02g028530' => 'spe', 'Sopen04g029590' => 'spe', 'Sopen05g029720' => 'spe', 'Sopen07g026360' => 'spe', 'Sopen07g026370' => 'spe', 'Sopen07g026380' => 'spe', 'Sopen07g026390' => 'spe', 'Sopen07g026410' => 'spe', 'Sopen07g026420' => 'spe', 'Sopen07g026450' => 'spe', 'Sp1g10140' => 'spa', 'Sp2g02820' => 'spa', 'Sp2g20270' => 'spa', 'Sp2g20280' => 'spa', 'Sp3g03750' => 'spa', 'Sp3g04150' => 'spa', 'Sp3g27600' => 'spa', 'Sp3g27630' => 'spa', 'Sp7g04750' => 'spa', 'Sp7g05050' => 'spa', 'Sp7g05550' => 'spa', 'Sp7g05700' => 'spa', 'Sp7g05720' => 'spa', 'Sp7g05730' => 'spa', 'Sp7g11180' => 'spa', 'Sp7g11190' => 'spa', 'Sp7g23230' => 'spa', 'SpUn0005_0030' => 'spa', 'SpUn0005_0140' => 'spa', 'SpUn0032_0020' => 'spa', 'TAR362G0983' => 'tar', 'TAR365G0257' => 'tar', 'TAR509G0002' => 'tar', 'TAR627G0243' => 'tar', 'TAR629G0942' => 'tar', 'TAR629G1851' => 'tar', 'TAR629G2738' => 'tar', 'TAR629G2748' => 'tar', 'TAR633G0349' => 'tar', 'TAR633G0559' => 'tar', 'TAR633G2720' => 'tar', 'TAR636G2519' => 'tar', 'THA.LOC104802821' => 'tha', 'THA.LOC104805805' => 'tha', 'THA.LOC104805808' => 'tha', 'THA.LOC104805998' => 'tha', 'THA.LOC104809520' => 'tha', 'THA.LOC104818647' => 'tha', 'THA.LOC104820088' => 'tha', 'THA.LOC104821689' => 'tha', 'THA.LOC104822871' => 'tha', 'THA.LOC104823638' => 'tha', 'THA.LOC104824965' => 'tha', 'Thecc.04G116500' => 'tca', 'Thecc.05G289400' => 'tca', 'Thecc.05G289600' => 'tca', 'Thecc.07G148000' => 'tca', 'Thecc.07G183500' => 'tca', 'Thhalv10003395m.g' => 'esa', 'Thhalv10004982m.g' => 'esa', 'Thhalv10005455m.g' => 'esa', 'Thhalv10005559m.g' => 'esa', 'Thhalv10015525m.g' => 'esa', 'Thhalv10020724m.g' => 'esa', 'Thhalv10023503m.g' => 'esa', 'Thhalv10023859m.g' => 'esa', 'Thhalv10026078m.g' => 'esa', 'Thhalv10027016m.g' => 'esa', 'Thhalv10027791m.g' => 'esa', 'Thhalv10028215m.g' => 'esa', 'Thhalv10028218m.g' => 'esa', 'TPR.G10355' => 'tpr', 'TPR.G11149' => 'tpr', 'TPR.G11150' => 'tpr', 'TPR.G11156' => 'tpr', 'TPR.G11159' => 'tpr', 'TPR.G12724' => 'tpr', 'TPR.G138' => 'tpr', 'TPR.G1760' => 'tpr', 'TPR.G22162' => 'tpr', 'TPR.G22656' => 'tpr', 'TPR.G28220' => 'tpr', 'TPR.G29875' => 'tpr', 'TPR.G32649' => 'tpr', 'TPR.G35956' => 'tpr', 'TPR.G38544' => 'tpr', 'TPR.G4014' => 'tpr', 'TPR.G40362' => 'tpr', 'TPR.G6965' => 'tpr', 'TPR.G8677' => 'tpr', 'TWI12G1087' => 'twi', 'TWI12G1301' => 'twi', 'TWI36G0743' => 'twi', 'TWI38G1831' => 'twi', 'TWI38G2228' => 'twi', 'TWI38G2394' => 'twi', 'TWI39G0036' => 'twi', 'TWI53G1920' => 'twi', 'TWI56G0981' => 'twi', 'TWI56G1443' => 'twi', 'TWI56G1445' => 'twi', 'unitig_0.g2465' => 'ugi', 'unitig_46.g18731' => 'ugi', 'unitig_52.g17109' => 'ugi', 'unitig_578.g16302' => 'ugi', 'unitig_61.g26146' => 'ugi', 'unitig_8.g3763' => 'ugi', 'unitig_8.g4775' => 'ugi', 'vmacro04270' => 'vma', 'vmacro05159' => 'vma', 'vmacro12238' => 'vma', 'vmacro19686' => 'vma', 'VMungo0251G0713' => 'vmu', 'VMungo0331G1226' => 'vmu', 'VMungo0540G0362' => 'vmu', 'VMungo0540G0581' => 'vmu', 'VMungo0540G1345' => 'vmu', 'VMungo0540G2102' => 'vmu', 'VMungo0720G1181' => 'vmu', 'VMungo0720G1239' => 'vmu', 'VMungo0720G1497' => 'vmu', 'VMungo0720G2018' => 'vmu', 'VMungo0720G3044' => 'vmu', 'VMungo1215G1528' => 'vmu', 'VMungo1309G0206' => 'vmu', 'VMungo1309G2551' => 'vmu', 'Zm00001eb018020' => 'zma', 'Zm00001eb054670' => 'zma', 'Zm00001eb063360' => 'zma', 'Zm00001eb095970' => 'zma', 'Zm00001eb096970' => 'zma', 'Zm00001eb100610' => 'zma', 'Zm00001eb110030' => 'zma', 'Zm00001eb127420' => 'zma', 'Zm00001eb171910' => 'zma', 'Zm00001eb176440' => 'zma', 'Zm00001eb216500' => 'zma', 'Zm00001eb299350' => 'zma', 'Zm00001eb304250' => 'zma', 'Zm00001eb304260' => 'zma', 'Zm00001eb314630' => 'zma', 'Zm00001eb328650' => 'zma', 'Zm00001eb338280' => 'zma', 'Zm00001eb394180' => 'zma' ) $gf_id = 'HOM05D000538' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000538' ) $data_identifier = 'HOM05D000538' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 29, 'aar' => (int) 9, 'aag' => (int) 2, 'ach' => (int) 14, 'amhyb' => (int) 4, 'aly' => (int) 19, 'aox' => (int) 10, 'arhy' => (int) 15, 'ath' => (int) 22, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 10, 'bca' => (int) 33, 'bol' => (int) 13, 'bra' => (int) 18, 'can' => (int) 14, 'cansat' => (int) 4, 'chi' => (int) 13, 'cru' => (int) 16, 'car' => (int) 10, 'cbr' => (int) 1, 'ccan' => (int) 4, 'cde' => (int) 14, 'cfa' => (int) 5, 'ccl' => (int) 7, 'cil' => (int) 8, 'cla' => (int) 5, 'col' => (int) 6, 'cpa' => (int) 5, 'csa' => (int) 5, 'camsi' => (int) 9, 'dca' => (int) 16, 'din' => (int) 10, 'dzi' => (int) 12, 'eca' => (int) 9, 'bvu' => (int) 4, 'egr' => (int) 3, 'fan' => (int) 27, 'fve' => (int) 5, 'gma' => (int) 18, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 2, 'han' => (int) 11, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 8, 'sun' => (int) 3, 'lal' => (int) 12, 'lja' => (int) 10, 'lonja' => (int) 8, 'lsa' => (int) 10, 'mes' => (int) 9, 'mpo' => (int) 1, 'mbi' => (int) 8, 'mdo' => (int) 11, 'mtr' => (int) 13, 'cme' => (int) 8, 'egut' => (int) 8, 'ama' => (int) 8, 'nta' => (int) 21, 'nnu' => (int) 8, 'oeu' => (int) 10, 'osa' => (int) 8, 'pax' => (int) 7, 'pgr' => (int) 9, 'stu' => (int) 10, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 3, 'ppe' => (int) 9, 'psa' => (int) 10, 'pso' => (int) 23, 'qlo' => (int) 17, 'rch' => (int) 6, 'rsi' => (int) 14, 'sbr' => (int) 12, 'sbo' => (int) 8, 'sci' => (int) 6, 'sed' => (int) 9, 'sgi' => (int) 3, 'sas' => (int) 34, 'shi' => (int) 2, 'smo' => (int) 1, 'sly' => (int) 13, 'spe' => (int) 12, 'spa' => (int) 20, 'tar' => (int) 12, 'tha' => (int) 11, 'tca' => (int) 5, 'esa' => (int) 13, 'tpr' => (int) 19, 'twi' => (int) 11, 'ugi' => (int) 7, 'vma' => (int) 4, 'vmu' => (int) 14, 'zma' => (int) 18 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb394180' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1